BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G06LP1|AL426580
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1508 1630 0.0
>3x_Contig1508
Length = 7899
Score = 1630 bits (810), Expect = 0.0
Identities = 832/852 (97%)
Strand = Plus / Plus
Query: 1 atcatctgtcttstggggaataagttggatctagtatctgaaagggaatcgacctcttta 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2336 atcatctgtcttgtggggaataagttggatctagtatctgaaagggaatcgacctcttta 2395
Query: 61 gtcgatsaagcggacgcacgcsastttgcacaasagaataatttgttgttccaccaggtc 120
|||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct: 2396 gtcgatgaagcggacgcacgcgagtttgcacaagagaataatttgttgttccaccaggtc 2455
Query: 121 agtcctaagactggagaaaacgtaatcaaastcttccaagatattggtgaaagattatat 180
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2456 agtgctaagactggagaaaacgtaatcaaagtcttccaagatattggtgaaagattatat 2515
Query: 181 ttgcagaacaaagataasatacaggaatcgaagaaacctaataataataatatatcattg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2516 ttgcagaacaaagataagatacaggaatcgaagaaacctaataataataatatatcattg 2575
Query: 241 caaagaccaagtacaaatsattcacagtcttgttgctcatgaagacsgctttattcgtat 300
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2576 caaagaccaagtacaaatgattcacagtcttgttgctcatgaagacggctttattcgtat 2635
Query: 301 gcctgcatatagatcttcasgccacaataaatatatatatacstttacstataaccatga 360
||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||
Sbjct: 2636 gcctgcatatagatcttcaggccacaataaatatatatatacgtttacgtataaccatga 2695
Query: 361 aacacacgcyagcccstataaatctttaacattsaggaacaaccsaggattttgaagaaa 420
||||||||| ||||| ||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 2696 aacacacgctagcccgtataaatctttaacattgaggaacaaccgaggattttgaagaaa 2755
Query: 421 tagttttgtttacattttttgatataggttttaagtgtattcagtatacatgattaatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2756 tagttttgtttacattttttgatataggttttaagtgtattcagtatacatgattaatta 2815
Query: 481 tgtggtattaatgtaagcytatgtagtgctaatctgtgcagcsttgaacaccaatagagg 540
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2816 tgtggtattaatgtaagcttatgtagtgctaatctgtgcagcgttgaacaccaatagagg 2875
Query: 541 aaataaatacaagaattggatcaaaggaacggacaaagtgaaaacattaaaactatttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2876 aaataaatacaagaattggatcaaaggaacggacaaagtgaaaacattaaaactatttta 2935
Query: 601 atctcttgcagatcaattcagctgcctttttcacaccttcttcagagcctaggacatata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2936 atctcttgcagatcaattcagctgcctttttcacaccttcttcagagcctaggacatata 2995
Query: 661 tmacattgttaaccttatcgctttttcttggaacatggataacagttttagtggcatttc 720
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2996 taacattgttaaccttatcgctttttcttggaacatggataacagttttagtggcatttc 3055
Query: 721 tgatttctctgatatttctaccgtttggtccaacaatagagttaaacttctttgcatcct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3056 tgatttctctgatatttctaccgtttggtccaacaatagagttaaacttctttgcatcct 3115
Query: 781 tggaccaaacgaaaccttcggtgttaacaagtttagcctcggcgattctgtcttctatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3116 tggaccaaacgaaaccttcggtgttaacaagtttagcctcggcgattctgtcttctatca 3175
Query: 841 atttggacgctt 852
||||||||||||
Sbjct: 3176 atttggacgctt 3187
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9139
Number of Sequences: 1807
Number of extensions: 9139
Number of successful extensions: 363
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)